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Ontology Information

Event Components and Biological Context

Step by step instructions on Event Components and Biological Context may be viewed here.

Further information on Event Components and Biological Context may be viewed on the attached pdf.

List of Ontologies

Ontology

Domain

 Data Source

Level of Biological Organization*

M

C

T

O

I

P

Gene Ontology (GO)

biology

 http://purl.obolibrary.org/obo/go.owl

Y

Y

Y

Y

Y

?

Chemical Entities of Biological Interest (CHEBI)

biochemistry

 http://purl.obolibrary.org/obo/chebi.owl

Y

X

X

X

X

X

Protein Ontology (PRO)

proteins

 http://purl.obolibrary.org/obo/pr.owl

Y

X

X

X

X

X

Protein-protein interaction (MI)

experiments

 http://purl.obolibrary.org/obo/mi.owl

Y

X

X

X

X

X

Cell Ontology (CL)

cells

http://purl.obolibrary.org/obo/cl.owl

X

Y

X

X

X

X

Uber Anatomy Ontology (UBERON)

anatomy

 http://purl.obolibrary.org/obo/uberon.owl

?

Y

Y

Y

?

?

Foundational Model of Anatomy (FMA)

anatomy

 http://purl.obolibrary.org/obo/fma.owl

Y

Y

Y

Y

X

X

Vertebrate Trait (VT)

vertebrate trait

 http://purl.obolibrary.org/obo/vt.owl

X

X

Y

Y

Y

X

Human Phenotype Ontology (HP)

phenotype

 http://purl.obolibrary.org/obo/hp.owl

X

Y

Y

Y

Y

X

Mammalian Phenotype Ontology (MP)

phenotype

 http://purl.obolibrary.org/obo/mp.owl

X

Y

Y

Y

Y

X

Neuro Behavior Ontology (NBO)

behavioral phenotypes

 http://purl.obolibrary.org/obo/nbo.owl

X

X

X

X

Y

X

Phenotypic Quality Ontology (PATO)

phenotype

 http://purl.obolibrary.org/obo/pato.owl

Y

Y

Y

Y

Y

Y

Population and Community Ontology (PCO)

populations and communities

 http://purl.obolibrary.org/obo/pco.owl

X

X

X

X

X

Y

UMLS/Medical Subject Headings (MeSH)

biomedical information

 https://www.nlm.nih.gov/mesh/download_mesh.html

Y

Y

Y

Y

Y

Y
                 

*Molecular, Cellular, Tissue, Organ, Individual, Population